PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.7G040500.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 186aa    MW: 20893.8 Da    PI: 9.5779
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.7G040500.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.21.6e-094473130
                        CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC CS
                 HLH  1 rrrahnerErrRRdriNsafeeLrellPka 30
                        ++ +hn+ Er RR++iN+ +++Lr+l P +
  Prupe.7G040500.1.p 44 KKLNHNASERERRKKINTLYSTLRSLFPAP 73
                        6789************************95 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.6E-83995IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.42E-64171No hitNo description
PROSITE profilePS508889.69943102IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.107.0E-84474IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000107.2E-74473IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    Send to blast
MMINEGNESA ESFLHCLSPH QQVDQFEFTL SSPMCGGGDS KVVKKLNHNA SERERRKKIN  60
TLYSTLRSLF PAPDQMHVKG LIQKKEELLS RLRRLQQQGD PIYNEKQSRS AAFSSLSASA  120
FAVSWLNDRE VVLQISSYVV QKSPLSQILV DLEEQWRTCA GARSLAKTTS FGSRFSLFNW  180
VLGIP*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007203481.11e-119hypothetical protein PRUPE_ppa022341mg, partial
SwissprotQ9M1K14e-20ORG2_ARATH; Transcription factor ORG2
TrEMBLM5WD391e-119M5WD39_PRUPE; Uncharacterized protein (Fragment)
STRINGVIT_13s0047g00450.t015e-34(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF24023379
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.11e-15bHLH family protein